CMS-116

CLINICAL LABORATORY IMPROVEMENT AMENDMENTS OF 1988 (CLIA) APPLICATION FOR CERTIFICATION

Agency
CMS
Revision
03/24
Fillable fields
297
Pages
10
Official source
CMS form page
Checked
October 20, 2026
Fill CMS-116 online
Page 1 of form CMS-116

Form CMS-116: CLIA Application for Certification

Form CMS-116 is the Clinical Laboratory Improvement Amendments (CLIA) Application for Certification from the Centers for Medicare & Medicaid Services. Its instructions say CLIA requires every facility that tests human specimens for the diagnosis, prevention or treatment of any disease or impairment, or the assessment of health, to meet certain Federal requirements, and that such a facility is considered a laboratory under the law. They add that waived tests are not exempt from CLIA.

The form has ten sections: general information, type of certificate requested, type of laboratory, hours of testing, multiple sites, waived testing, PPM testing, non-waived testing, type of control, and the director's other laboratories. It ends with a consent statement signed by the owner or director. It carries OMB No. 0938-0581, with an expiration date of 03/31/2027, and estimates an average of one hour per response.

The form says completed applications go to the local State Agency, with no payment enclosed. You can fill it out free in your browser on this page and download the result without an account.

Top of page 1 of Form CMS-116: CLIA Application for Certification, as printed by CMS

What's on Form CMS-116

Section I: General information

CLIA identification number (blank for an initial application), application type and effective date, facility name, federal tax ID, email, phone, fax, physical facility address (no P.O. boxes), optional mailing and corporate addresses, and the director's name, credentials and phone.

Section II: Type of certificate

Check one: Certificate of Waiver, Certificate for Provider Performed Microscopy Procedures (PPM), Certificate of Compliance, or Certificate of Accreditation with the accrediting organization: The Joint Commission, ACHC, AABB, A2LA, CAP, COLA or ASHI.

Sections III to V: Lab type, hours, sites

One laboratory type from codes 01 to 29, testing hours for each day in HH:MM format or a 24/7 box, and whether one certificate covers multiple sites under one of three regulatory exceptions.

Sections VI to VIII: Tests and volume

Waived tests by analyte, test name and manufacturer; the nine PPM procedures; non-waived tests marked M (moderate) or H (high complexity); and estimated annual test volume by specialty and subspecialty.

Sections IX and X: Control and director

Type of control (voluntary nonprofit, for profit or government, codes 01 to 09), whether a non-United States-based government or entity has ownership or control, and other separately certified laboratories the director also directs.

Consent and signature

A penalty notice under section 353 of the Public Health Service Act, consent to operate under HHS standards and permit inspection, printed names of the director and owner, and the owner or director's signature in ink or a secure electronic signature, with the date.

The form says all applicable sections are completed. Each certificate type in Section II names the sections it needs.

How to fill out Form CMS-116

  1. 1

    Pick the certificate type

    The instructions say to select the certificate based on the highest level of test complexity the laboratory performs. Each box in Section II lists the sections to complete, for example Sections I to VI and IX to X for a Certificate of Waiver.

  2. 2

    Complete Section I

    Check the application type and enter the facility, address and director details. The instructions note that the facility name given is what appears on the certificate.

  3. 3

    Describe the lab and its tests

    Choose the laboratory type, enter testing hours, answer the multiple sites question, and list tests in Sections VI to VIII with estimated annual volume. The form includes guidelines for counting tests.

  4. 4

    Gather director qualifications

    For a PPM, Compliance or Accreditation certificate, the instructions list verification of State licensure, as applicable, plus documentation of qualifications, credentials and laboratory experience. They say leaving it out delays processing.

  5. 5

    Sign and send to the State Agency

    The owner or director signs and dates the consent. The form says completed applications go to the local State Agency and that no payment is sent with them.

Why fill Form CMS-116 on indox

You get the real form, filled in a browser tab, with nothing standing between you and the finished PDF.

  • Fill the form right in your browser, no software to install
  • Free to fill and free to download, with no account
  • The official blank straight from the CMS, not a copy someone retyped
  • Works on a phone, tablet or computer

Where it goes, fees and timing

Where to send it

To the local State Agency. The form points to the State Agency contact list at cms.gov/Regulations-and-Guidance/Legislation/CLIA/Downloads/CLIASA.pdf. The CMS address in the PRA statement is for comments on the form only, and the form says not to send applications there.

Fees

The form says not to send any money with the application. After the State Agency processes it, a fee remittance coupon shows the CLIA number and the amount due for the certificate and, if applicable, the compliance (survey) or validation fee. The form lists no amounts.

Registration Certificate

For a Certificate of Compliance or Accreditation, the form says the laboratory first pays for and receives a Registration Certificate, which permits testing until an onsite inspection, or until CMS receives verification of accreditation.

Accreditation evidence

For a Certificate of Accreditation, the form asks for evidence of accreditation by an approved organization, or of application for it, within 11 months after receipt of the Certificate of Registration.

Incomplete applications

The instructions say incomplete applications cannot be processed and will be returned to the facility, and ask for legible print or typed entries.

Time to complete

The form estimates an average of one hour per response. It carries OMB No. 0938-0581 with an expiration date of 03/31/2027.

Who uses Form CMS-116?

  • Laboratories testing human specimens

    The instructions say a facility that tests human specimens for diagnosis, prevention or treatment of disease, or assessment of health, is a laboratory under CLIA, even if it performs only one or a few basic tests or does not charge for testing.

  • Facilities doing only waived tests

    The instructions say facilities performing only tests categorized as waived apply for a CLIA Certificate of Waiver.

  • Certified laboratories with changes

    Section I also has boxes for a survey or recertification, a change in certificate type, a change in laboratory director and other changes such as location or closure, each with an effective date.

  • Laboratory directors

    For non-waived testing, including PPM, the form says proof of the director's education, training and experience under subpart M of the CLIA regulations is submitted with the application.

  • Not collection-only or forensic sites

    The instructions say facilities only collecting or preparing specimens, or only serving as a mailing service, are not considered laboratories, and CLIA does not apply to a facility that only performs forensic testing.

The instructions describe which facilities count as laboratories under CLIA and which do not.

Official sources and the blank

Do it all with indox

View all 94 tools

Questions about Form CMS-116

Which facilities file Form CMS-116?

The instructions say a facility that tests human specimens for diagnosis, prevention or treatment of disease, or assessment of health, is a laboratory under CLIA. Facilities that only collect or prepare specimens, only mail them, or only do forensic testing are not covered.

Where is Form CMS-116 sent?

The form says completed applications go to the local State Agency. Contact details are at cms.gov/Regulations-and-Guidance/Legislation/CLIA/Downloads/CLIASA.pdf.

Is a payment sent with Form CMS-116?

No. The form says not to send any payment with the application. A fee remittance coupon with the amount due is issued after the State Agency processes it.

How is the certificate type chosen?

The instructions say to select it based on the highest level of test complexity performed. A Certificate of Waiver covers only waived tests, PPM covers PPM and waived tests, and Compliance or Accreditation covers waived, PPM and moderate or high complexity tests.

Do labs that run only waived tests need a CLIA certificate?

The instructions say waived tests are not exempt from CLIA, and facilities performing only waived tests apply for a Certificate of Waiver.

Can one certificate cover several testing sites?

Section V allows it under three exceptions: a lab not at a fixed location, a not-for-profit or government lab doing limited public health testing (not more than 15 moderate complexity or waived tests in combination), or hospital labs on one campus under common direction.

How many laboratories can one director direct?

The instructions say that for a Certificate for PPM, Compliance or Accreditation, an individual can serve as director for no more than five certificates.